Journal article
Damsel: analysis and visualisation of DamID sequencing in R
CG Page, A Londsdale, KA Mitchell, J Schröder, KF Harvey, A Oshlack
Bioinformatics | OXFORD UNIV PRESS | Published : 2024
Abstract
DamID sequencing is a technique to map the genome-wide interaction of a protein with DNA. Damsel is the first Bioconductor package to provide an end to end analysis for DamID sequencing data within R. Damsel performs quantification and testing of significant binding sites along with exploratory and visual analysis. Damsel produces results consistent with previous analysis approaches.
Grants
Awarded by National Health and Medical Research Council
Funding Acknowledgements
This work was supported by an Investigator grant [APP1196256 to A.O.] from the National Health and Medical Research Council of Australia. This work was supported by an Investigator grant [APP1194467 to K.F.H.] from the National Health and Medical Research Council of Australia.